eef2 expression vector Search Results


94
TaKaRa eef2 kinase overexpression
Eef2 Kinase Overexpression, supplied by TaKaRa, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Thermo Fisher eef2 expression vector
Eef2 Expression Vector, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Nikon nis-elements ar analysis software
Nis Elements Ar Analysis Software, supplied by Nikon, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Nikon mitochondria
Mitochondria, supplied by Nikon, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Fasmac Co Ltd chemically synthesized sense and antisense single stranded dnas targeting 5'-caugggc aacaucaugaucgauccuguccu-3' in eef2 mrna
Chemically Synthesized Sense And Antisense Single Stranded Dnas Targeting 5' Caugggc Aacaucaugaucgauccuguccu 3' In Eef2 Mrna, supplied by Fasmac Co Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Becton Dickinson 33.3% matrigel
33.3% Matrigel, supplied by Becton Dickinson, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Danaher Inc vector pgex 5x 3
Vector Pgex 5x 3, supplied by Danaher Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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TaKaRa trna shrna expression vector
Trna Shrna Expression Vector, supplied by TaKaRa, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Becton Dickinson matrigel
Matrigel, supplied by Becton Dickinson, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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clea japan inc balb/cajclnu/nu female mice
Balb/Cajclnu/Nu Female Mice, supplied by clea japan inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Millipore antibody against phospho-alpha synuclein (pser129)
Effects of efk-1 deletion on ethanol avoidance, pharyngeal pumping, and area restricted searching behavior in C. elegans expressing human AS-A53T. a - c Analysis of ethanol avoidance ( n = 100–150 worms/measurement) ( a ), pharyngeal pumping ( n = 10–15 worms/measurement) ( b ), and area restricted searching behavior ( n = 10–15 worms/measurement) ( c ) in control (wild type N2) worms, in efk-1(ok3609) null mutant worms (efk-1 del ), in worms expressing human mutant AS-A53T ( <t>Pdat-1::a-synuclein[A53T]),</t> and in efk-1(ok3609) null mutant worms expressing AS-A53T ( efk-1(ok3609); Pdat-1::a-synuclein[A53T] ). Statistical analysis: one-way ANOVA with post-hoc Bonferroni test; * p < 0.05, *** p < 0.005, NS = not significant; error bars indicate mean ± S.E.M. from at least three independent experiments
Antibody Against Phospho Alpha Synuclein (Pser129), supplied by Millipore, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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86
Thermo Fisher pcdna3 1 vector
AMPK mediates autophagy in Leydig cells (LCs) upon the HsCG challenge. (A-C) TM3 cells were pre-treated with rapamycin (100 μM), compound C (1 μM) or SBI-0206965 (2 μM) for 1 h followed by exposure to HsCG for 6 h. The cell extracts were subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the HsCG-treated cells. (D) The expression of p-PRKAA2 in LCs at different developmental stages was examined by immunofluorescence staining. Fluorescence intensity was presented as means ± SEM (n = 3). *P < 0.05 vs. post-natal days 10 (D10) group. (E) TM3 cells were treated with HsCG for indicated times. The cell extracts were subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells. (F) Protein levels of PPM1A, STK11/LKB1, and CAMKK2 in LCs at different developmental stages were analyzed by western blotting. *P < 0.05 vs. D10 group. (G and H) TM3 cells were transfected with siRNA targeting Camkk2 (si-Camkk2) <t>or</t> <t>pcDNA3.1-Ppm1a</t> vector (O/E Ppm1a; O/E, overexpression) for 36 h followed by exposure to HsCG for 6 h. The cell extracts were subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the HsCG-treated cells
Pcdna3 1 Vector, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


Effects of efk-1 deletion on ethanol avoidance, pharyngeal pumping, and area restricted searching behavior in C. elegans expressing human AS-A53T. a - c Analysis of ethanol avoidance ( n = 100–150 worms/measurement) ( a ), pharyngeal pumping ( n = 10–15 worms/measurement) ( b ), and area restricted searching behavior ( n = 10–15 worms/measurement) ( c ) in control (wild type N2) worms, in efk-1(ok3609) null mutant worms (efk-1 del ), in worms expressing human mutant AS-A53T ( Pdat-1::a-synuclein[A53T]), and in efk-1(ok3609) null mutant worms expressing AS-A53T ( efk-1(ok3609); Pdat-1::a-synuclein[A53T] ). Statistical analysis: one-way ANOVA with post-hoc Bonferroni test; * p < 0.05, *** p < 0.005, NS = not significant; error bars indicate mean ± S.E.M. from at least three independent experiments

Journal: Acta Neuropathologica Communications

Article Title: Activity of translation regulator eukaryotic elongation factor-2 kinase is increased in Parkinson disease brain and its inhibition reduces alpha synuclein toxicity

doi: 10.1186/s40478-018-0554-9

Figure Lengend Snippet: Effects of efk-1 deletion on ethanol avoidance, pharyngeal pumping, and area restricted searching behavior in C. elegans expressing human AS-A53T. a - c Analysis of ethanol avoidance ( n = 100–150 worms/measurement) ( a ), pharyngeal pumping ( n = 10–15 worms/measurement) ( b ), and area restricted searching behavior ( n = 10–15 worms/measurement) ( c ) in control (wild type N2) worms, in efk-1(ok3609) null mutant worms (efk-1 del ), in worms expressing human mutant AS-A53T ( Pdat-1::a-synuclein[A53T]), and in efk-1(ok3609) null mutant worms expressing AS-A53T ( efk-1(ok3609); Pdat-1::a-synuclein[A53T] ). Statistical analysis: one-way ANOVA with post-hoc Bonferroni test; * p < 0.05, *** p < 0.005, NS = not significant; error bars indicate mean ± S.E.M. from at least three independent experiments

Article Snippet: The following antibodies were employed to stain serial tissue sections, as indicated: antibody against phospho-eEF2 (Thr56) (Novus Biologicals, #NB100–92518) [ , ], and antibody against phospho-alpha synuclein (pSer129; EMD Millipore, #MABN826), using the alkaline phosphatise conjugated streptavidin-biotin ABC kit (Vector Labs, # AK-5000).

Techniques: Expressing, Control, Mutagenesis

AMPK mediates autophagy in Leydig cells (LCs) upon the HsCG challenge. (A-C) TM3 cells were pre-treated with rapamycin (100 μM), compound C (1 μM) or SBI-0206965 (2 μM) for 1 h followed by exposure to HsCG for 6 h. The cell extracts were subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the HsCG-treated cells. (D) The expression of p-PRKAA2 in LCs at different developmental stages was examined by immunofluorescence staining. Fluorescence intensity was presented as means ± SEM (n = 3). *P < 0.05 vs. post-natal days 10 (D10) group. (E) TM3 cells were treated with HsCG for indicated times. The cell extracts were subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells. (F) Protein levels of PPM1A, STK11/LKB1, and CAMKK2 in LCs at different developmental stages were analyzed by western blotting. *P < 0.05 vs. D10 group. (G and H) TM3 cells were transfected with siRNA targeting Camkk2 (si-Camkk2) or pcDNA3.1-Ppm1a vector (O/E Ppm1a; O/E, overexpression) for 36 h followed by exposure to HsCG for 6 h. The cell extracts were subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the HsCG-treated cells

Journal: Autophagy

Article Title: m 6 A mRNA methylation regulates testosterone synthesis through modulating autophagy in Leydig cells

doi: 10.1080/15548627.2020.1720431

Figure Lengend Snippet: AMPK mediates autophagy in Leydig cells (LCs) upon the HsCG challenge. (A-C) TM3 cells were pre-treated with rapamycin (100 μM), compound C (1 μM) or SBI-0206965 (2 μM) for 1 h followed by exposure to HsCG for 6 h. The cell extracts were subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the HsCG-treated cells. (D) The expression of p-PRKAA2 in LCs at different developmental stages was examined by immunofluorescence staining. Fluorescence intensity was presented as means ± SEM (n = 3). *P < 0.05 vs. post-natal days 10 (D10) group. (E) TM3 cells were treated with HsCG for indicated times. The cell extracts were subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells. (F) Protein levels of PPM1A, STK11/LKB1, and CAMKK2 in LCs at different developmental stages were analyzed by western blotting. *P < 0.05 vs. D10 group. (G and H) TM3 cells were transfected with siRNA targeting Camkk2 (si-Camkk2) or pcDNA3.1-Ppm1a vector (O/E Ppm1a; O/E, overexpression) for 36 h followed by exposure to HsCG for 6 h. The cell extracts were subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the HsCG-treated cells

Article Snippet: Working dilution Abcam Rabbit anti-LC3B ab48394 WB, 1:2000 IF, 1: 1000 Abcam Mouse anti-SQSTM1 ab56416 WB, 1:1000 Abcam Rabbit anti-METTL3 ab195352 WB, 1:2000 IF, 1: 1000 Abcam Mouse anti-FTO ab92981 WB, 1:1000 Boster Rabbit anti-ACTB MO1263-2 WB,1:500 Cell Signaling Technology Rabbit anti-ULK1 6439 WB,1:1000 Cell Signaling Technology Rabbit anti-p-ULK1 S757 14,202 WB,1:1000 Cell Signaling Technology Rabbit anti-p-ULK1 S555 5869 WB,1:1000 Cell Signaling Technology Rabbit anti-PRKAA2 5831 WB,1:1000 Cell Signaling Technology Rabbit anti-p-PRKAA2 T172 50,081 WB,1:1000 IF, 1:50 Cell Signaling Technology Rabbit anti-MTOR 2983 WB,1:1000 Cell Signaling Technology Rabbit anti-p-MTOR S2448 5536 WB,1:1000 Cell Signaling Technology Rabbit anti-RPS6KB1 9202 WB,1:1000 Cell Signaling Technology Rabbit anti-p-RPS6KB1 9205 WB,1:1000 Cell Signaling Technology Rabbit anti-PPM1A 3549 WB,1:1000 Cell Signaling Technology Rabbit anti-SMAD3 9523 WB,1:1000 Cell Signaling Technology Rabbit anti-FOS 2250 WB,1:1000 Cell Signaling Technology Rabbit anti-p-PIK3C3/VPS34 13,857 WB,1:1000 Santa Cruz Biotechnology Mouse anti-HSD3B sc-100,466 IF,1:50 Santa Cruz Biotechnology Mouse anti-SP1 sc-420 WB,1:500 Santa Cruz Biotechnology Mouse anti-FOXM1 sc-376,471 WB,1:500 Santa Cruz Biotechnology Mouse anti-CEBPB sc-7962 WB,1:500 ChIP,1:50 Santa Cruz Biotechnology Mouse anti-TFEB sc-166,736 WB,1:500 ChIP,1:50 Santa Cruz Biotechnology Mouse anti-NR5A1 sc-393,592 WB,1:500 Santa Cruz Biotechnology Mouse anti-MYC sc-40 WB,1:500 Santa Cruz Biotechnology Mouse anti-LMNB1 sc-374,015 WB,1:500 Santa Cruz Biotechnology Mouse anti-EEF2 sc-166,415 WB,1:500 Santa Cruz Biotechnology Mouse anti-EIF3A sc-376,651 WB,1:500 Santa Cruz Biotechnology Mouse anti-PIK3C3/VPS34 sc-365,404 WB,1:500 Proteintech Rabbit anti-CAMKK2 11,549-1-AP WB,1:1000 IF,1:50 Proteintech Rabbit anti-STK11/LKB1 10,746-1-AP WB,1:1000 Proteintech Rabbit anti-ALKBH5 16,837-1-AP WB,1:1000 IF,1:50 Proteintech Rabbit anti-YTHDF1 17,479-1-AP WB,1:1000 Co-IP, 1:50 RIP, 1:50 Proteintech Rabbit anti-YTHDF2 24,744-1-AP WB,1:1000 Co-IP, 1:50 RIP, 1:50 Proteintech Rabbit anti-RELA 10,745-1-AP WB,1:1000 Sigma Rabbit anti-METTL14 HPA038002 WB,1:2000 IF,1:100 Synaptic Systems Rabbit anti-m 6 A 202,003 IF,1:200 Open in a separate window Primary antibodies used in this study Plasmid and siRNA transfection Gene sequences coding for Mettl14 and Alkbh5 were cloned into the pcDNA3.1 vector (Invitrogen, V79020).

Techniques: Western Blot, Expressing, Immunofluorescence, Staining, Fluorescence, Transfection, Plasmid Preparation, Over Expression

The m6A mRNA methylation regulates AMPK activity in Leydig cells (LCs). (A) m6A levels in LCs were assessed by immunofluorescence staining. Fluorescence intensity was presented as means ± SEM (n = 3). *P < 0.05 vs. post-natal day 10 (D10) group. (B) Protein levels of m6A regulatory enzymes in LCs at various developmental stages were examined by western blotting and quantitatively analyzed. Data were presented as means ± SEM (n = 3). *P < 0.05 vs. D10 group. (C) Relative m6A levels were measured by ELISA-based m6A quantitative analyses. *P < 0.05 vs. D10 group. TM3 cells were treated with HsCG for indicated times. (D) The expression of m6A regulatory enzymes were examined by western blotting and quantitatively analyzed. *P < 0.05 vs. the control cells. (E) Relative m6A levels were measured by ELISA-based m6A quantitative analyses. *P < 0.05 vs. the control cells. (F) The expression of both HSD3B and m6A levels in LCs at 6 h was examined by immunofluorescence staining. Fluorescence intensity was presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells. (G) TM3 cells were transfected with increasing doses of pcDNA3.1-Mettl14 vector (O/E Mettl14; O/E, overexpression) for 36 h followed by HsCG treatment for 6 h. The cell extracts were subjected to western blotting and quantitative analysis. Data are presented as the means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the HsCG-treated cells. (H) TM3 cells were transfected with siRNA targeting Alkbh5 (si-Alkbh5) and cultured for 36 h followed by HsCG treatment for 6 h. The cell extracts were subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the HsCG-treated cells

Journal: Autophagy

Article Title: m 6 A mRNA methylation regulates testosterone synthesis through modulating autophagy in Leydig cells

doi: 10.1080/15548627.2020.1720431

Figure Lengend Snippet: The m6A mRNA methylation regulates AMPK activity in Leydig cells (LCs). (A) m6A levels in LCs were assessed by immunofluorescence staining. Fluorescence intensity was presented as means ± SEM (n = 3). *P < 0.05 vs. post-natal day 10 (D10) group. (B) Protein levels of m6A regulatory enzymes in LCs at various developmental stages were examined by western blotting and quantitatively analyzed. Data were presented as means ± SEM (n = 3). *P < 0.05 vs. D10 group. (C) Relative m6A levels were measured by ELISA-based m6A quantitative analyses. *P < 0.05 vs. D10 group. TM3 cells were treated with HsCG for indicated times. (D) The expression of m6A regulatory enzymes were examined by western blotting and quantitatively analyzed. *P < 0.05 vs. the control cells. (E) Relative m6A levels were measured by ELISA-based m6A quantitative analyses. *P < 0.05 vs. the control cells. (F) The expression of both HSD3B and m6A levels in LCs at 6 h was examined by immunofluorescence staining. Fluorescence intensity was presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells. (G) TM3 cells were transfected with increasing doses of pcDNA3.1-Mettl14 vector (O/E Mettl14; O/E, overexpression) for 36 h followed by HsCG treatment for 6 h. The cell extracts were subjected to western blotting and quantitative analysis. Data are presented as the means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the HsCG-treated cells. (H) TM3 cells were transfected with siRNA targeting Alkbh5 (si-Alkbh5) and cultured for 36 h followed by HsCG treatment for 6 h. The cell extracts were subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the HsCG-treated cells

Article Snippet: Working dilution Abcam Rabbit anti-LC3B ab48394 WB, 1:2000 IF, 1: 1000 Abcam Mouse anti-SQSTM1 ab56416 WB, 1:1000 Abcam Rabbit anti-METTL3 ab195352 WB, 1:2000 IF, 1: 1000 Abcam Mouse anti-FTO ab92981 WB, 1:1000 Boster Rabbit anti-ACTB MO1263-2 WB,1:500 Cell Signaling Technology Rabbit anti-ULK1 6439 WB,1:1000 Cell Signaling Technology Rabbit anti-p-ULK1 S757 14,202 WB,1:1000 Cell Signaling Technology Rabbit anti-p-ULK1 S555 5869 WB,1:1000 Cell Signaling Technology Rabbit anti-PRKAA2 5831 WB,1:1000 Cell Signaling Technology Rabbit anti-p-PRKAA2 T172 50,081 WB,1:1000 IF, 1:50 Cell Signaling Technology Rabbit anti-MTOR 2983 WB,1:1000 Cell Signaling Technology Rabbit anti-p-MTOR S2448 5536 WB,1:1000 Cell Signaling Technology Rabbit anti-RPS6KB1 9202 WB,1:1000 Cell Signaling Technology Rabbit anti-p-RPS6KB1 9205 WB,1:1000 Cell Signaling Technology Rabbit anti-PPM1A 3549 WB,1:1000 Cell Signaling Technology Rabbit anti-SMAD3 9523 WB,1:1000 Cell Signaling Technology Rabbit anti-FOS 2250 WB,1:1000 Cell Signaling Technology Rabbit anti-p-PIK3C3/VPS34 13,857 WB,1:1000 Santa Cruz Biotechnology Mouse anti-HSD3B sc-100,466 IF,1:50 Santa Cruz Biotechnology Mouse anti-SP1 sc-420 WB,1:500 Santa Cruz Biotechnology Mouse anti-FOXM1 sc-376,471 WB,1:500 Santa Cruz Biotechnology Mouse anti-CEBPB sc-7962 WB,1:500 ChIP,1:50 Santa Cruz Biotechnology Mouse anti-TFEB sc-166,736 WB,1:500 ChIP,1:50 Santa Cruz Biotechnology Mouse anti-NR5A1 sc-393,592 WB,1:500 Santa Cruz Biotechnology Mouse anti-MYC sc-40 WB,1:500 Santa Cruz Biotechnology Mouse anti-LMNB1 sc-374,015 WB,1:500 Santa Cruz Biotechnology Mouse anti-EEF2 sc-166,415 WB,1:500 Santa Cruz Biotechnology Mouse anti-EIF3A sc-376,651 WB,1:500 Santa Cruz Biotechnology Mouse anti-PIK3C3/VPS34 sc-365,404 WB,1:500 Proteintech Rabbit anti-CAMKK2 11,549-1-AP WB,1:1000 IF,1:50 Proteintech Rabbit anti-STK11/LKB1 10,746-1-AP WB,1:1000 Proteintech Rabbit anti-ALKBH5 16,837-1-AP WB,1:1000 IF,1:50 Proteintech Rabbit anti-YTHDF1 17,479-1-AP WB,1:1000 Co-IP, 1:50 RIP, 1:50 Proteintech Rabbit anti-YTHDF2 24,744-1-AP WB,1:1000 Co-IP, 1:50 RIP, 1:50 Proteintech Rabbit anti-RELA 10,745-1-AP WB,1:1000 Sigma Rabbit anti-METTL14 HPA038002 WB,1:2000 IF,1:100 Synaptic Systems Rabbit anti-m 6 A 202,003 IF,1:200 Open in a separate window Primary antibodies used in this study Plasmid and siRNA transfection Gene sequences coding for Mettl14 and Alkbh5 were cloned into the pcDNA3.1 vector (Invitrogen, V79020).

Techniques: Methylation, Activity Assay, Immunofluorescence, Staining, Fluorescence, Western Blot, Enzyme-linked Immunosorbent Assay, Expressing, Transfection, Plasmid Preparation, Over Expression, Cell Culture

m6A mRNA methylation impacts the expression of regulators of the AMPK pathway. (A) TM3 cells were transfected with shRNA targeting Mettl14 (sh-Mettl14) followed by compound C treatment for 6 h. The cell extracts were subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the sh-Mettl14-treated cells. (B) TM3 cells were transfected with increasing doses of pcDNA3.1-Mettl14 vector (O/E Mettl14; O/E, overexpression). The cell extracts were subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells. (C) TM3 cells were transfected with sh-Mettl14 before treatment with siRNA targeting Camkk2 (si-Camkk2), and cell lysate was subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the sh-Mettl14-treated cells. (D) TM3 cells were transfected with the pcDNA3.1-Alkbh5 (O/E Alkbh5) vector before treatment with si-Camkk2, and cell lysate was subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the O/E Alkbh5-treated cells. (E) TM3 cells were transfected with sh-Mettl14 before transfection with pcDNA3.1-Ppm1a (O/E Ppm1a), and cell lysate was subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the sh-Mettl14-treated cells. (F) TM3 cells were transfected with pcDNA3.1-Alkbh5 (O/E Alkbh5) before transfection with pcDNA3.1-Ppm1a (O/E Ppm1a), and cell lysate was subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the O/E Alkbh5-treated cells

Journal: Autophagy

Article Title: m 6 A mRNA methylation regulates testosterone synthesis through modulating autophagy in Leydig cells

doi: 10.1080/15548627.2020.1720431

Figure Lengend Snippet: m6A mRNA methylation impacts the expression of regulators of the AMPK pathway. (A) TM3 cells were transfected with shRNA targeting Mettl14 (sh-Mettl14) followed by compound C treatment for 6 h. The cell extracts were subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the sh-Mettl14-treated cells. (B) TM3 cells were transfected with increasing doses of pcDNA3.1-Mettl14 vector (O/E Mettl14; O/E, overexpression). The cell extracts were subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells. (C) TM3 cells were transfected with sh-Mettl14 before treatment with siRNA targeting Camkk2 (si-Camkk2), and cell lysate was subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the sh-Mettl14-treated cells. (D) TM3 cells were transfected with the pcDNA3.1-Alkbh5 (O/E Alkbh5) vector before treatment with si-Camkk2, and cell lysate was subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the O/E Alkbh5-treated cells. (E) TM3 cells were transfected with sh-Mettl14 before transfection with pcDNA3.1-Ppm1a (O/E Ppm1a), and cell lysate was subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the sh-Mettl14-treated cells. (F) TM3 cells were transfected with pcDNA3.1-Alkbh5 (O/E Alkbh5) before transfection with pcDNA3.1-Ppm1a (O/E Ppm1a), and cell lysate was subjected to western blotting and quantitative analysis. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the O/E Alkbh5-treated cells

Article Snippet: Working dilution Abcam Rabbit anti-LC3B ab48394 WB, 1:2000 IF, 1: 1000 Abcam Mouse anti-SQSTM1 ab56416 WB, 1:1000 Abcam Rabbit anti-METTL3 ab195352 WB, 1:2000 IF, 1: 1000 Abcam Mouse anti-FTO ab92981 WB, 1:1000 Boster Rabbit anti-ACTB MO1263-2 WB,1:500 Cell Signaling Technology Rabbit anti-ULK1 6439 WB,1:1000 Cell Signaling Technology Rabbit anti-p-ULK1 S757 14,202 WB,1:1000 Cell Signaling Technology Rabbit anti-p-ULK1 S555 5869 WB,1:1000 Cell Signaling Technology Rabbit anti-PRKAA2 5831 WB,1:1000 Cell Signaling Technology Rabbit anti-p-PRKAA2 T172 50,081 WB,1:1000 IF, 1:50 Cell Signaling Technology Rabbit anti-MTOR 2983 WB,1:1000 Cell Signaling Technology Rabbit anti-p-MTOR S2448 5536 WB,1:1000 Cell Signaling Technology Rabbit anti-RPS6KB1 9202 WB,1:1000 Cell Signaling Technology Rabbit anti-p-RPS6KB1 9205 WB,1:1000 Cell Signaling Technology Rabbit anti-PPM1A 3549 WB,1:1000 Cell Signaling Technology Rabbit anti-SMAD3 9523 WB,1:1000 Cell Signaling Technology Rabbit anti-FOS 2250 WB,1:1000 Cell Signaling Technology Rabbit anti-p-PIK3C3/VPS34 13,857 WB,1:1000 Santa Cruz Biotechnology Mouse anti-HSD3B sc-100,466 IF,1:50 Santa Cruz Biotechnology Mouse anti-SP1 sc-420 WB,1:500 Santa Cruz Biotechnology Mouse anti-FOXM1 sc-376,471 WB,1:500 Santa Cruz Biotechnology Mouse anti-CEBPB sc-7962 WB,1:500 ChIP,1:50 Santa Cruz Biotechnology Mouse anti-TFEB sc-166,736 WB,1:500 ChIP,1:50 Santa Cruz Biotechnology Mouse anti-NR5A1 sc-393,592 WB,1:500 Santa Cruz Biotechnology Mouse anti-MYC sc-40 WB,1:500 Santa Cruz Biotechnology Mouse anti-LMNB1 sc-374,015 WB,1:500 Santa Cruz Biotechnology Mouse anti-EEF2 sc-166,415 WB,1:500 Santa Cruz Biotechnology Mouse anti-EIF3A sc-376,651 WB,1:500 Santa Cruz Biotechnology Mouse anti-PIK3C3/VPS34 sc-365,404 WB,1:500 Proteintech Rabbit anti-CAMKK2 11,549-1-AP WB,1:1000 IF,1:50 Proteintech Rabbit anti-STK11/LKB1 10,746-1-AP WB,1:1000 Proteintech Rabbit anti-ALKBH5 16,837-1-AP WB,1:1000 IF,1:50 Proteintech Rabbit anti-YTHDF1 17,479-1-AP WB,1:1000 Co-IP, 1:50 RIP, 1:50 Proteintech Rabbit anti-YTHDF2 24,744-1-AP WB,1:1000 Co-IP, 1:50 RIP, 1:50 Proteintech Rabbit anti-RELA 10,745-1-AP WB,1:1000 Sigma Rabbit anti-METTL14 HPA038002 WB,1:2000 IF,1:100 Synaptic Systems Rabbit anti-m 6 A 202,003 IF,1:200 Open in a separate window Primary antibodies used in this study Plasmid and siRNA transfection Gene sequences coding for Mettl14 and Alkbh5 were cloned into the pcDNA3.1 vector (Invitrogen, V79020).

Techniques: Methylation, Expressing, Transfection, shRNA, Western Blot, Plasmid Preparation, Over Expression

m6A triggers the translation of the Ppm1a transcript. (A and B) TM3 cells with or without transfection of shRNA targeting Mettl14 (sh-Mettl14) were pre-treated with cycloheximide (CHX, 10 μg/mL) for 3 h followed by exposure to HsCG for indicated times. Expression levels of PPM1A were examined by western blotting and quantitatively analyzed. (C and D) TM3 cells with or without transfection of shRNA targeting Alkbh5 (sh-Alkbh5) were pre-treated with MG-132 (2 μM) for 1.5 h followed by exposure to HsCG for 6 h. Expression levels of PPM1A were examined by western blotting and quantitatively analyzed. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the MG-132-treated cells. (E) Schematic representation of the position of m6A motifs with Ppm1a transcript. (F) Abundance of the Ppm1a transcripts among mRNA immunoprecipitated with anti-m6A antibody was measured by qRT-PCR. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the IgG group. (G) Abundance of the Ppm1a transcript among mRNA immunoprecipitated with anti-m6A antibody from cells with or without transfection of sh-Alkbh5 was measured by qRT-PCR. Data are presented as means ± SEM (n = 3). *P < 0.05. (H) Ppm1a-3ʹ-UTR of the wild-type or containing an m6A consensus sequence mutant (A to G) were fused with a luciferase reporter. (I and J) Luciferase activity of Camkk2-3ʹ-UTR was measured and normalized to Renilla luciferase activity. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells. (K) Schematic representation of mutation in pcDNA3.1-Ppm1a-CDS-3ʹUTR is shown. (L) TM3 cells were transfected with sh-Mettl14 followed by transfection with indicated vectors, and cell lysate was subjected to western blotting

Journal: Autophagy

Article Title: m 6 A mRNA methylation regulates testosterone synthesis through modulating autophagy in Leydig cells

doi: 10.1080/15548627.2020.1720431

Figure Lengend Snippet: m6A triggers the translation of the Ppm1a transcript. (A and B) TM3 cells with or without transfection of shRNA targeting Mettl14 (sh-Mettl14) were pre-treated with cycloheximide (CHX, 10 μg/mL) for 3 h followed by exposure to HsCG for indicated times. Expression levels of PPM1A were examined by western blotting and quantitatively analyzed. (C and D) TM3 cells with or without transfection of shRNA targeting Alkbh5 (sh-Alkbh5) were pre-treated with MG-132 (2 μM) for 1.5 h followed by exposure to HsCG for 6 h. Expression levels of PPM1A were examined by western blotting and quantitatively analyzed. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells; #P < 0.05 vs. the MG-132-treated cells. (E) Schematic representation of the position of m6A motifs with Ppm1a transcript. (F) Abundance of the Ppm1a transcripts among mRNA immunoprecipitated with anti-m6A antibody was measured by qRT-PCR. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the IgG group. (G) Abundance of the Ppm1a transcript among mRNA immunoprecipitated with anti-m6A antibody from cells with or without transfection of sh-Alkbh5 was measured by qRT-PCR. Data are presented as means ± SEM (n = 3). *P < 0.05. (H) Ppm1a-3ʹ-UTR of the wild-type or containing an m6A consensus sequence mutant (A to G) were fused with a luciferase reporter. (I and J) Luciferase activity of Camkk2-3ʹ-UTR was measured and normalized to Renilla luciferase activity. Data are presented as means ± SEM (n = 3). *P < 0.05 vs. the control cells. (K) Schematic representation of mutation in pcDNA3.1-Ppm1a-CDS-3ʹUTR is shown. (L) TM3 cells were transfected with sh-Mettl14 followed by transfection with indicated vectors, and cell lysate was subjected to western blotting

Article Snippet: Working dilution Abcam Rabbit anti-LC3B ab48394 WB, 1:2000 IF, 1: 1000 Abcam Mouse anti-SQSTM1 ab56416 WB, 1:1000 Abcam Rabbit anti-METTL3 ab195352 WB, 1:2000 IF, 1: 1000 Abcam Mouse anti-FTO ab92981 WB, 1:1000 Boster Rabbit anti-ACTB MO1263-2 WB,1:500 Cell Signaling Technology Rabbit anti-ULK1 6439 WB,1:1000 Cell Signaling Technology Rabbit anti-p-ULK1 S757 14,202 WB,1:1000 Cell Signaling Technology Rabbit anti-p-ULK1 S555 5869 WB,1:1000 Cell Signaling Technology Rabbit anti-PRKAA2 5831 WB,1:1000 Cell Signaling Technology Rabbit anti-p-PRKAA2 T172 50,081 WB,1:1000 IF, 1:50 Cell Signaling Technology Rabbit anti-MTOR 2983 WB,1:1000 Cell Signaling Technology Rabbit anti-p-MTOR S2448 5536 WB,1:1000 Cell Signaling Technology Rabbit anti-RPS6KB1 9202 WB,1:1000 Cell Signaling Technology Rabbit anti-p-RPS6KB1 9205 WB,1:1000 Cell Signaling Technology Rabbit anti-PPM1A 3549 WB,1:1000 Cell Signaling Technology Rabbit anti-SMAD3 9523 WB,1:1000 Cell Signaling Technology Rabbit anti-FOS 2250 WB,1:1000 Cell Signaling Technology Rabbit anti-p-PIK3C3/VPS34 13,857 WB,1:1000 Santa Cruz Biotechnology Mouse anti-HSD3B sc-100,466 IF,1:50 Santa Cruz Biotechnology Mouse anti-SP1 sc-420 WB,1:500 Santa Cruz Biotechnology Mouse anti-FOXM1 sc-376,471 WB,1:500 Santa Cruz Biotechnology Mouse anti-CEBPB sc-7962 WB,1:500 ChIP,1:50 Santa Cruz Biotechnology Mouse anti-TFEB sc-166,736 WB,1:500 ChIP,1:50 Santa Cruz Biotechnology Mouse anti-NR5A1 sc-393,592 WB,1:500 Santa Cruz Biotechnology Mouse anti-MYC sc-40 WB,1:500 Santa Cruz Biotechnology Mouse anti-LMNB1 sc-374,015 WB,1:500 Santa Cruz Biotechnology Mouse anti-EEF2 sc-166,415 WB,1:500 Santa Cruz Biotechnology Mouse anti-EIF3A sc-376,651 WB,1:500 Santa Cruz Biotechnology Mouse anti-PIK3C3/VPS34 sc-365,404 WB,1:500 Proteintech Rabbit anti-CAMKK2 11,549-1-AP WB,1:1000 IF,1:50 Proteintech Rabbit anti-STK11/LKB1 10,746-1-AP WB,1:1000 Proteintech Rabbit anti-ALKBH5 16,837-1-AP WB,1:1000 IF,1:50 Proteintech Rabbit anti-YTHDF1 17,479-1-AP WB,1:1000 Co-IP, 1:50 RIP, 1:50 Proteintech Rabbit anti-YTHDF2 24,744-1-AP WB,1:1000 Co-IP, 1:50 RIP, 1:50 Proteintech Rabbit anti-RELA 10,745-1-AP WB,1:1000 Sigma Rabbit anti-METTL14 HPA038002 WB,1:2000 IF,1:100 Synaptic Systems Rabbit anti-m 6 A 202,003 IF,1:200 Open in a separate window Primary antibodies used in this study Plasmid and siRNA transfection Gene sequences coding for Mettl14 and Alkbh5 were cloned into the pcDNA3.1 vector (Invitrogen, V79020).

Techniques: Transfection, shRNA, Expressing, Western Blot, Immunoprecipitation, Quantitative RT-PCR, Sequencing, Mutagenesis, Luciferase, Activity Assay